miRBase entry: dsi-mir-iab-4

Stem-loop dsi-mir-iab-4

Accession

MI0009420

Description

Drosophila simulans dsi-mir-iab-4 precursor miRNA

Sequence

ucguaaACGUAUACUGAAUGUAUCCUGAguguauccuaucCGGUAUACCUUCAGUAUACGUAACacga
((((..((((((((((((.((((((.((..(....)..)).)).)))).))))))))))))...))))

Structure

    -aa            U    -  U  gu u 
ucgu   ACGUAUACUGAA GUAU CC GA  g a
||||   |||||||||||| |||| || ||  |  
agca   UGCAUAUGACUU CAUA GG cu  c u
    CAA            C    U  C  au c

Annotation confidence Not enough data

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Genome context

chr3R: 8791217-8791284 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-iab-4

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-iab-4-5p

Accession	MIMAT0008855
Description	Drosophila simulans dsi-miR-iab-4-5p mature miRNA
Sequence	7 - ACGUAUACUGAAUGUAUCCUGA - 28
Evidence	not_experimental

Mature dsi-miR-iab-4-3p

Accession	MIMAT0008856
Description	Drosophila simulans dsi-miR-iab-4-3p mature miRNA
Sequence	41 - CGGUAUACCUUCAGUAUACGUAAC - 64
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218