Stem-loop dsi-mir-33

Accession

MI0009431

Description

Drosophila simulans dsi-mir-33 precursor miRNA

Literature search

1 open access papers mention dsi-mir-33
(1 sentences)

Sequence

323 reads, 1836.0 reads per million, 6 experiments

cggagaugacacgaAGGUGCAUUGUAGUCGCAUUGUCugucccaauugcuucaggcaauacaacuucagugcaagcucugugcauuucac
..((((((.((((.((.(((((((.(((.(.((((((((............)))))))).).))).)))))))..)).))))))))))..

Structure

cg      a    a  -G       U   C C        uccca 
  gagaug cacg AG  UGCAUUG AGU G AUUGUCug     a
  |||||| |||| ||  ||||||| ||| | ||||||||      
  cuuuac gugu uc  acgugac uca c uaacggac     u
ca      -    c  ga       u   a a        uucgu 

Annotation confidence Not enough data

Genome context

ref|NT_479535.1|: 19298922-19299011 [+]

Mature dsi-miR-33-5p

• Accession: MIMAT0053483
• Description: Drosophila simulans dsi-miR-33-5p mature miRNA
• Sequence: 17 - GUGCAUUGUAGUCGCAUUGUC - 37
• Evidence: not_experimental

Mature dsi-miR-33-3p

• Accession: MIMAT0008866
• Description: Drosophila simulans dsi-miR-33-3p mature miRNA
• Sequence: 15 - AGGUGCAUUGUAGUCGCAUUG - 35
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218