Stem-loop dsi-mir-316

Accession

MI0009434

Description

Drosophila simulans dsi-mir-316 precursor miRNA

Sequence

160 reads, 857.0 reads per million, 6 experiments

aaauucuagucgauuUGUCUUUUUCCGCUUACUGGCGuuucauuuccacaacgACAGGAAAGGGAAAAAGGCGUAuuuacuaugaguuu
((((((((((.(((.(((((((((((.(((.(((.((((..........)))).)))..)))))))))))))).))).)))).))))))

Structure

      -    c   u           G   -A   G    ucau 
aaauuc uagu gau UGUCUUUUUCC CUU  CUG CGuu    u
|||||| |||| ||| ||||||||||| |||  ||| ||||     
uuugag auca uuA GCGGAAAAAGG GAA  GAC gcaa    u
      u    u   U           -   AG   A    cacc 

Annotation confidence High

Genome context

ref|NT_479535.1|: 21077986-21078074 [-]

Mature dsi-miR-316-5p

• Accession: MIMAT0008869
• Description: Drosophila simulans dsi-miR-316-5p mature miRNA
• Sequence: 16 - UGUCUUUUUCCGCUUACUGGCG - 37
• Evidence: not_experimental

Mature dsi-miR-316-3p

• Accession: MIMAT0053484
• Description: Drosophila simulans dsi-miR-316-3p mature miRNA
• Sequence: 54 - ACAGGAAAGGGAAAAAGGCGUA - 75
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218