miRBase entry: dsi-mir-304

Stem-loop dsi-mir-304


Accession
MI0009448
Description
Drosophila simulans dsi-mir-304 precursor miRNA


Sequence

77 reads, 462.0 reads per million, 6 experiments
gcagcauugaaUAAUCUCAAUUUGUAAAUGUGAGcgguuugagccauuugacgcacucacuuugcaauuggagauugcucgagacugc
((((..((((.(((((((...(((((((.(((((.((((.((....)).))).).))))))))))))...))))))).))))..))))

Structure
    ca    a       AAU       U     c -   u  g 
gcag  uuga UAAUCUC   UUGUAAA GUGAG g guu ga c
||||  |||| |||||||   ||||||| ||||| | ||| ||  
cguc  agcu guuagag   aacguuu cacuc c cag uu c
    ag    c       guu       -     a g   u  a 


Annotation confidence Not enough data
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Genome context
ref|NC_029795.1|: 14556651-14556738 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dsi-mir-304
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dsi-miR-304-5p

Accession MIMAT0008882
Description Drosophila simulans dsi-miR-304-5p mature miRNA
Sequence 12 - UAAUCUCAAUUUGUAAAUGUGAG - 34
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218