Stem-loop dsi-mir-282

Accession

MI0009449

Description

Drosophila simulans dsi-mir-282 precursor miRNA

Sequence

3541 reads, 29823.0 reads per million, 6 experiments

aguuuccuuuuaaaucUAGCCUCUACUAGGCUUUGUCugugcauucgaaagccgaucagACAUAGCCUAUAAGAGGUUAGguguaccaaggcgaaca
.((((((((....(((((((((((..((((((.((((((..(...........)..)))))).))))))..))))))))))).....)))).)))).

Structure

a    -    -uuaa           AC      U      ug auuc 
 guuu ccuu     aucUAGCCUCU  UAGGCU UGUCug  c    g
 |||| ||||     |||||||||||  |||||| ||||||  |    a
 caag ggaa     ugGAUUGGAGA  AUCCGA ACAgac  g    a
a    c    ccaug           AU      U      ua ccga 

Annotation confidence High

Genome context

ref|NT_479535.1|: 3148571-3148667 [+]

Mature dsi-miR-282-5p

• Accession: MIMAT0053488
• Description: Drosophila simulans dsi-miR-282-5p mature miRNA
• Sequence: 17 - UAGCCUCUACUAGGCUUUGUC - 37
• Evidence: not_experimental

Mature dsi-miR-282-3p

• Accession: MIMAT0008883
• Description: Drosophila simulans dsi-miR-282-3p mature miRNA
• Sequence: 60 - ACAUAGCCUAUAAGAGGUUAG - 80
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218