Stem-loop dsi-mir-31a

Accession

MI0009453

Description

Drosophila simulans dsi-mir-31a precursor miRNA

Sequence

1113 reads, 5591.0 reads per million, 6 experiments

uccguugguaaauUGGCAAGAUGUCGGCAUAGCUGAcguugaaaagcgauuuugaagagcgcuaugcugcaucuagucaguuguucaaugga
((((((((..(((((((.(((((.(((((((((.(...((.((((....)))).))...))))))))))))))).)))))))..))))))))

Structure

        ua       A     U         U Acg  g    g 
uccguugg  aauUGGC AGAUG CGGCAUAGC G   uu aaaa c
||||||||  ||||||| ||||| ||||||||| |   || ||||  
agguaacu  uugacug ucuac gucguaucg c   aa uuuu g
        ug       a     -         - gag  g    a 

Annotation confidence Not enough data

Genome context

ref|NT_479534.1|: 14317349-14317440 [-]

Mature dsi-miR-31a-5p

• Accession: MIMAT0008886
• Description: Drosophila simulans dsi-miR-31a-5p mature miRNA
• Sequence: 14 - UGGCAAGAUGUCGGCAUAGCUGA - 36
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218