Stem-loop dsi-mir-276a

Accession

MI0009459

Description

Drosophila simulans dsi-mir-276a precursor miRNA

Literature search

1 open access papers mention dsi-mir-276a
(1 sentences)

Sequence

21104 reads, 115121.0 reads per million, 6 experiments

ccugguuuuugccaucAGCGAGGUAUAGAGUUCCUACGuucauuauaaacucgUAGGAACUUCAUACCGUGCUCUuggaagaccaaa
..(((((((..(((..((((.(((((.(((((((((((.............))))))))))).))))).))))..))))))))))..

Structure

cc       ug   uc    A     A           uucau 
  ugguuuu  cca  AGCG GGUAU GAGUUCCUACG     u
  |||||||  |||  |||| ||||| |||||||||||     a
  accagaa  ggu  UCGU CCAUA UUCAAGGAUgc     u
aa       --   UC    G     C           ucaaa 

Annotation confidence High

Genome context

ref|NT_479535.1|: 10101897-10101983 [+]

Mature dsi-miR-276a-5p

• Accession: MIMAT0053493
• Description: Drosophila simulans dsi-miR-276a-5p mature miRNA
• Sequence: 17 - AGCGAGGUAUAGAGUUCCUACG - 38
• Evidence: not_experimental

Mature dsi-miR-276a-3p

• Accession: MIMAT0008892
• Description: Drosophila simulans dsi-miR-276a-3p mature miRNA
• Sequence: 54 - UAGGAACUUCAUACCGUGCUCU - 75
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218