Stem-loop dsi-mir-309

Accession

MI0009461

Description

Drosophila simulans dsi-mir-309 precursor miRNA

Literature search

1 open access papers mention dsi-mir-309
(1 sentences)

Sequence

auuauacgacaaaccuuguucgguuuugccaauuuccaagccaGCACUGGGUAAAGUUUGUCCUAuaau
((((((.(((((((.(((((((((.(((.(.........).))).))))))))).))))))).))))))

Structure

      c       c         u   c aau 
auuaua gacaaac uuguucggu uug c   u
|||||| ||||||| ||||||||| ||| |   u
uaauAU CUGUUUG AAUGGGUCA Gac g   c
      C       A         C   c aac 

Annotation confidence Not enough data

Genome context

ref|NT_479534.1|: 16151553-16151621 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-309

Mature dsi-miR-309-3p

• Accession: MIMAT0008894
• Description: Drosophila simulans dsi-miR-309-3p mature miRNA
• Sequence: 44 - GCACUGGGUAAAGUUUGUCCUA - 65
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218