Stem-loop dsi-mir-276b

Accession

MI0009462

Description

Drosophila simulans dsi-mir-276b precursor miRNA

Literature search

1 open access papers mention dsi-mir-276b
(3 sentences)

Sequence

8572 reads, 42042.0 reads per million, 6 experiments

accgaagucuuuuuaccaucAGCGAGGUAUAGAGUUCCUACGuuccuauucagucgUAGGAACUUAAUACCGUGCUCUuggaggacugucgac
..(((((((((....(((..((((.(((((.(((((((((((............))))))))))).))))).))))..))))))))).)))..

Structure

ac   -      uuua   uc    A     A           uuccu 
  cga agucuu    cca  AGCG GGUAU GAGUUCCUACG     a
  ||| ||||||    |||  |||| ||||| |||||||||||      
  gcu ucagga    ggu  UCGU CCAUA UUCAAGGAUgc     u
ca   g      ----   UC    G     A           ugacu 

Annotation confidence High

Genome context

ref|NT_479535.1|: 10056910-10057002 [+]

Mature dsi-miR-276b-5p

• Accession: MIMAT0053494
• Description: Drosophila simulans dsi-miR-276b-5p mature miRNA
• Sequence: 21 - AGCGAGGUAUAGAGUUCCUACG - 42
• Evidence: not_experimental

Mature dsi-miR-276b-3p

• Accession: MIMAT0008895
• Description: Drosophila simulans dsi-miR-276b-3p mature miRNA
• Sequence: 57 - UAGGAACUUAAUACCGUGCUCU - 78
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218