miRBase entry: dsi-mir-92a

Stem-loop dsi-mir-92a

Accession

MI0009465

Description

Drosophila simulans dsi-mir-92a precursor miRNA

Literature search

2 open access papers mention dsi-mir-92a
(26 sentences)

Sequence

56 reads, 437.0 reads per million, 4 experiments

aauaugaauuucccguaggacgggaaggugucaacguuuugcauuucgaauaaaCAUUGCACUUGUCCCGGCCUAUgggcgguuuguaau
..((((((((.((((((((.((((((((((.(((.((((............)))).)))))))).))))).)))))))).))))))))..

Structure

aa        u        a     -     u   c    ugcau 
  uaugaauu cccguagg cggga aggug caa guuu     u
  |||||||| |||||||| ||||| ||||| ||| ||||      
  auguuugg gggUAUCC GCCCU UUCAC GUU Caaa     u
ua        c        G     G     -   A    uaagc

Annotation confidence Not enough data

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Genome context

ref|NT_479536.1|: 20983520-20983609 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-92a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-92a-3p

Accession	MIMAT0008898
Description	Drosophila simulans dsi-miR-92a-3p mature miRNA
Sequence	55 - CAUUGCACUUGUCCCGGCCUAU - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218