miRBase entry: dsi-mir-133

Stem-loop dsi-mir-133

Accession

MI0009468

Description

Drosophila simulans dsi-mir-133 precursor miRNA

Sequence

cugcaacgcuguguguagcugguugacaucgggucagaucuguuuuuuaagcauUUGGUCCCCUUCAACCAGCUGUagccagugguugcug
..(((((((((..(((((((((((((....(((((((((((........)).)))))).)))..)))))))))))))..)))).)))))..

Structure

cu     -    ug             cauc   -      -  guu 
  gcaac gcug  uguagcugguuga    ggg ucagau cu   u
  ||||| ||||  |||||||||||||    ||| |||||| ||    
  cguug ugac  aUGUCGACCAACU    CCC GGUUua ga   u
gu     g    cg             --UC   U      c  auu

Annotation confidence Not enough data

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Genome context

chr2L: 20179937-20180027 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-133

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-133

Accession	MIMAT0008900
Description	Drosophila simulans dsi-miR-133 mature miRNA
Sequence	55 - UUGGUCCCCUUCAACCAGCUGU - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218