Stem-loop dsi-mir-281-1

Accession

MI0009472

Description

Drosophila simulans dsi-mir-281-1 precursor miRNA

Sequence

239 reads, 1418.0 reads per million, 6 experiments

cgaauaagugaauAAAGAGAGCUGUCCGUCGACAGUccagaaagcauuuaauaucacUGUCAUGGAAUUGCUCUCUUUGUauaauauucg
((((((.....(((((((((((..(((((.((((((...................)))))))))))...)))))))))))....))))))

Structure

      aguga           -UG     C      ccagaaag 
cgaaua     auAAAGAGAGC   UCCGU GACAGU        c
||||||     |||||||||||   ||||| ||||||        a
gcuuau     UGUUUCUCUCG   AGGUA CUGUca        u
      -aaua           UUA     -      cuauaauu 

Annotation confidence High

Genome context

ref|NT_479534.1|: 8762466-8762555 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-281-1

Mature dsi-miR-281-1-5p

• Accession: MIMAT0008905
• Description: Drosophila simulans dsi-miR-281-1-5p mature miRNA
• Sequence: 14 - AAAGAGAGCUGUCCGUCGACAGU - 36
• Evidence: not_experimental

Mature dsi-miR-281-3p

• Accession: MIMAT0008906
• Description: Drosophila simulans dsi-miR-281-3p mature miRNA
• Sequence: 58 - UGUCAUGGAAUUGCUCUCUUUGU - 80
• Evidence: not_experimental

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218