Stem-loop dvi-mir-314

Accession

MI0009475

Description

Drosophila virilis dvi-mir-314 precursor miRNA

Sequence

ucGUAACUUGUGUGGCUUGAAUGUACCugguugaggaacgaauucaacguuuggauuuuguugccuuuggUAUUCGAGCCAAUAAGUUCGG
.((.(((((((.((((((((..(((((.....(((((((((((((((...))))).)))))).)))).)))))))))))))))))))))).

Structure

u  U       G        AU     ugguu    -      -     c 
 cG AACUUGU UGGCUUGA  GUACC     gagg aacgaa uucaa  
 || ||||||| ||||||||  |||||     |||| |||||| ||||| g
 GC UUGAAUA ACCGAGCU  UAUgg     uucc uuguuu agguu  
G  -       -        --     ----u    g      u     u 

Annotation confidence Not enough data

Genome context

scaffold_13049: 23988161-23988251 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-314

Mature dvi-miR-314-3p

• Accession: MIMAT0008908
• Description: Drosophila virilis dvi-miR-314-3p mature miRNA
• Sequence: 71 - UAUUCGAGCCAAUAAGUUCGG - 91
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-314-5p

• Accession: MIMAT0032041
• Description: Drosophila virilis dvi-miR-314-5p mature miRNA
• Sequence: 3 - GUAACUUGUGUGGCUUGAAUGUACC - 27
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372