Stem-loop dvi-mir-274

Accession

MI0009487

Description

Drosophila virilis dvi-mir-274 precursor miRNA

Sequence

204954 reads, 765.0 reads per million, 37 experiments

guuuguugcaguuucggUUUGUGACCGACACUAACGGGUaguuggggcaccucgaauacgcuguuuuaCUCGUUUUUGCGAUCACAAAUUCUgaaauugcaacga
..((((((((((((((((((((((.((.((..(((((((((..(.(((...........))).).)))))))))..)))).)))))))..)))))))))))))))

Structure

gu               --       C  A  CU         uu g   accu 
  uuguugcaguuucgg  UUUGUGA CG CA  AACGGGUag  g ggc    c
  |||||||||||||||  ||||||| || ||  |||||||||  | |||    g
  agcaacguuaaagUC  AAACACU GC GU  UUGCUCauu  u ucg    a
--               UU       A  -  UU         -u g   caua 

Annotation confidence High

Genome context

scaffold_13049: 23860717-23860821 [+]

Mature dvi-miR-274-5p

• Accession: MIMAT0008920
• Description: Drosophila virilis dvi-miR-274-5p mature miRNA
• Sequence: 18 - UUUGUGACCGACACUAACGGGU - 39
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-274-3p

• Accession: MIMAT0053496
• Description: Drosophila virilis dvi-miR-274-3p mature miRNA
• Sequence: 69 - CUCGUUUUUGCGAUCACAAAUUCU - 92
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372