miRBase entry: dvi-mir-318

Stem-loop dvi-mir-318

Accession

MI0009489

Description

Drosophila virilis dvi-mir-318 precursor miRNA

Sequence

uuuaugggauacaccaaguucaguuuugucagauguccaagcaUCACUGGGCUUUGUUUAUCUCAuaag
.((((((((((.((.(((((((((.......(((((....)))))))))))))).)).)))))))))).

Structure

u          c  c         uuuguca     c 
 uuaugggaua ac aaguucagu       gaugu c
 |||||||||| || |||||||||       |||||  
 aauACUCUAU UG UUCGGGUCA       CUacg a
g          U  U         -------     a

Annotation confidence Not enough data

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Genome context

scaffold_13047: 1194332-1194400 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-318

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-318

Accession	MIMAT0008922
Description	Drosophila virilis dvi-miR-318 mature miRNA
Sequence	44 - UCACUGGGCUUUGUUUAUCUCA - 65
Evidence	experimental Illumina [2]

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218

PubMed ID: 24448446
Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"RNA (2014) 20:360-372