miRBase entry: dvi-mir-287

Stem-loop dvi-mir-287

Accession

MI0009496

Description

Drosophila virilis dvi-mir-287 precursor miRNA

Sequence

gugcauaauguuugaaauuuugcacacauuuacaauaauuguaaaUGUGUUGAAAAUCGUUUGCACaa
(((((.((((......(((((..((((((((((((...))))))))))))..))))))))))))))..

Structure

--     u    uuugaa     gc            u 
  gugca aaug      auuuu  acacauuuacaa  
  ||||| ||||      |||||  |||||||||||| a
  CACGU UUGC      UAAAA  UGUGUaaauguu  
aa     -    ------     GU            a

Annotation confidence Not enough data

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Genome context

scaffold_12963: 16502565-16502632 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-287

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-287

Accession	MIMAT0008930
Description	Drosophila virilis dvi-miR-287 mature miRNA
Sequence	46 - UGUGUUGAAAAUCGUUUGCAC - 66
Evidence	experimental Illumina [2]

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218

PubMed ID: 24448446
Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"RNA (2014) 20:360-372