Stem-loop dvi-mir-282

Accession

MI0009498

Description

Drosophila virilis dvi-mir-282 precursor miRNA

Sequence

aauuuccuuauaaaucuagcCUCUACUAGGCUUUGUCUgugcauucgauauacggucagACAUAGCCUAUGAGAGGUUAGGuguaccaagggga
..(((((((....(((((((((((..((((((.((((((.((............)))))))).))))))..))))))))))).....)))))))

Structure

aa       -auaa           AC      U      u  auucg 
  uuuccuu     aucuagcCUCU  UAGGCU UGUCUg gc     a
  |||||||     |||||||||||  |||||| |||||| ||      
  aggggaa     uGGAUUGGAGA  AUCCGA ACAgac ug     u
--       ccaug           GU      U      -  gcaua 

Annotation confidence Not enough data

Genome context

scaffold_12758: 910711-910804 [-]

Mature dvi-miR-282-5p

• Accession: MIMAT0008932
• Description: Drosophila virilis dvi-miR-282-5p mature miRNA
• Sequence: 21 - CUCUACUAGGCUUUGUCU - 38
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-282-3p

• Accession: MIMAT0032059
• Description: Drosophila virilis dvi-miR-282-3p mature miRNA
• Sequence: 60 - ACAUAGCCUAUGAGAGGUUAGG - 81
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372