Stem-loop dvi-mir-124

Accession

MI0009505

Description

Drosophila virilis dvi-mir-124 precursor miRNA

Sequence

ucguuugguacguuuuucuccuGGUAUCCACUGUAGGCCUCUAUGaauuuugaccaUAAGGCACGCGGUGAAUGCCAAGagcgaacgaaacucuacaa
..((((.((.((((((.....((((((.((((((..((((.((((.........))))))))..)))))).)))))))))))).)).)))).......

Structure

-----uc    g  a      ucucc      C      AG    C    aau 
       guuu gu cguuuu     uGGUAU CACUGU  GCCU UAUG   u
       |||| || ||||||     |||||| ||||||  |||| ||||   u
       caaa ca gcgaGA     ACCGUA GUGGCG  CGGA AUac   u
aacaucu    g  a      -----      A      CA    -    cag 

Annotation confidence Not enough data

Genome context

scaffold_12963: 16493163-16493260 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-124

Mature dvi-miR-124-3p

• Accession: MIMAT0008939
• Description: Drosophila virilis dvi-miR-124-3p mature miRNA
• Sequence: 57 - UAAGGCACGCGGUGAAUGCCAAG - 79
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-124-5p

• Accession: MIMAT0032065
• Description: Drosophila virilis dvi-miR-124-5p mature miRNA
• Sequence: 23 - GGUAUCCACUGUAGGCCUCUAUG - 45
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372