miRBase entry: dvi-mir-305

Stem-loop dvi-mir-305

Accession

MI0009506

Description

Drosophila virilis dvi-mir-305 precursor miRNA

Literature search

1 open access papers mention dvi-mir-305
(1 sentences)

Sequence

caugucuAUUGUACUUCAUCAGGUGCUCuggugugacuuguaaccCGGCACAUGUUGAAGUACACUCAauaug
(((((....(((((((((.((.(((((..((.((........))))))))).)).)))))))))....)))))

Structure

     cuAU         U  G     Cu  u  gac 
caugu    UGUACUUCA CA GUGCU  gg gu   u
|||||    ||||||||| || |||||  || ||    
guaua    ACAUGAAGU GU CACGG  Cc ca   u
     ACUC         U  A     --  -  aug

Annotation confidence Not enough data

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Genome context

scaffold_12963: 15419842-15419914 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-305

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-305-5p

Accession	MIMAT0008940
Description	Drosophila virilis dvi-miR-305-5p mature miRNA
Sequence	8 - AUUGUACUUCAUCAGGUGCUC - 28
Evidence	experimental Illumina [2]

Mature dvi-miR-305-3p

Accession	MIMAT0032066
Description	Drosophila virilis dvi-miR-305-3p mature miRNA
Sequence	46 - CGGCACAUGUUGAAGUACACUCA - 68
Evidence	experimental Illumina [2]

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218

PubMed ID: 24448446
Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"RNA (2014) 20:360-372