Stem-loop dvi-mir-315a

Accession

MI0009510

Description

Drosophila virilis dvi-mir-315a precursor miRNA

Sequence

cgccuauaucaUUUUGAUUGUUGCUCAGAAAGCCcugcauucaauacuuggcuuucgaguaauaaucgaaaccaaauaagcg
(((.(((....(((((((((((((((.(((((((..(.........)..))))))))))))))))))))))....))).)))

Structure

   c   auca               A       cu cau 
cgc uau    UUUUGAUUGUUGCUC GAAAGCC  g   u
||| |||    ||||||||||||||| |||||||  |   c
gcg aua    aaagcuaauaaugag cuuucgg  c   a
   a   aacc               -       uu aua 

Annotation confidence Not enough data

Genome context

scaffold_13049: 18083590-18083671 [-]

Mature dvi-miR-315a

• Accession: MIMAT0008944
• Description: Drosophila virilis dvi-miR-315a mature miRNA
• Sequence: 12 - UUUUGAUUGUUGCUCAGAAAGCC - 34
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372