Stem-loop dvi-mir-280

Accession

MI0009532

Description

Drosophila virilis dvi-mir-280 precursor miRNA

Sequence

uggcuuuuaUGUAUUUACGUUGCAUAUGAAAUGAUAuuuauaguaaacagauuauuuuauaugcagguauacaugccaga
((((....(((((..(((.((((((((((((((((...............))))))))))))))))))))))))))))..

Structure

--    uuuu     UU   G                Auuuau 
  uggc    aUGUA  UAC UUGCAUAUGAAAUGAU      a
  ||||    |||||  ||| ||||||||||||||||      g
  accg    uacau  aug gacguauauuuuauua      u
ag    ----     --   -                gacaaa 

Annotation confidence Not enough data

Genome context

scaffold_12875: 9206208-9206287 [+]

Mature dvi-miR-280

• Accession: MIMAT0008965
• Description: Drosophila virilis dvi-miR-280 mature miRNA
• Sequence: 10 - UGUAUUUACGUUGCAUAUGAAAUGAUA - 36
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372