Stem-loop dvi-mir-31a

Accession

MI0009534

Description

Drosophila virilis dvi-mir-31a precursor miRNA

Literature search

1 open access papers mention dvi-mir-31a
(1 sentences)

Sequence

ucuguuguucaauUGGCAAGAUGUCGGCAUAGCUGAcguuugaaagcgcauuuuuauagCGCUAUGCUGCAUCUAGUCAGUuauucaaugga
(((((((...(((((((.(((((.(((((((((((.((((....))))))..........)))))))))))))).)))))))...)))))))

Structure

       uuc       A     U         ----------  A    u 
ucuguug   aauUGGC AGAUG CGGCAUAGC          UG cguu g
|||||||   ||||||| ||||| |||||||||          || ||||  
agguaac   uUGACUG UCUAC GUCGUAUCG          ac gcga a
       uua       A     -         Cgauauuuuu  -    a 

Annotation confidence Not enough data

Genome context

scaffold_12875: 16937665-16937756 [-]

Mature dvi-miR-31a-5p

• Accession: MIMAT0008967
• Description: Drosophila virilis dvi-miR-31a-5p mature miRNA
• Sequence: 14 - UGGCAAGAUGUCGGCAUAGCUGA - 36
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-31a-3p

• Accession: MIMAT0032087
• Description: Drosophila virilis dvi-miR-31a-3p mature miRNA
• Sequence: 60 - CGCUAUGCUGCAUCUAGUCAGU - 81
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372