Stem-loop dvi-mir-285

Accession

MI0009536

Description

Drosophila virilis dvi-mir-285 precursor miRNA

Sequence

215572 reads, 773.0 reads per million, 37 experiments

ucaaauugaagAACUGAGAUCGAUUGGUGCAUAGauaucgcccaaaaaguaauucauuucaauucUAGCACCAUUCGAAAUCAGUGcuuuuuauucgaac
((.(((.((((.(((((..((((.((((((.((((............................)))))))))).))))..))))).))))..))).))..

Structure

--  a   -u    A     GA    U      A    uaucgcccaaaaa 
  uc aau  gaag ACUGA  UCGA UGGUGC UAGa             g
  || |||  |||| |||||  |||| |||||| ||||              
  ag uua  uuuc UGACU  AGCU ACCACG AUcu             u
ca  c   uu    G     AA    U      -    uaacuuuacuuaa 

Annotation confidence High

Genome context

scaffold_13049: 21101441-21101540 [+]

Mature dvi-miR-285-5p

• Accession: MIMAT0032089
• Description: Drosophila virilis dvi-miR-285-5p mature miRNA
• Sequence: 12 - AACUGAGAUCGAUUGGUGCAUAG - 34
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-285-3p

• Accession: MIMAT0008969
• Description: Drosophila virilis dvi-miR-285-3p mature miRNA
• Sequence: 66 - UAGCACCAUUCGAAAUCAGUG - 86
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372