Stem-loop dvi-mir-284

Accession

MI0009545

Description

Drosophila virilis dvi-mir-284 precursor miRNA

Sequence

112189 reads, 1276.0 reads per million, 37 experiments

guugcaguuCCUGGAAUUAAGUUGACUGUGUAGccuguaaagggaaggcuugugcacugcuuacaaaGUCAGCAACUUGAUUCCAGCAauugcggccc
(((((((((.((((((((((((((.(((((((((.((((.(((.....))).))))..)).))))....))))))))))))))))).)))))))))..

Structure

--         C              A   ----    -  -c    a   g 
  guugcaguu CUGGAAUUAAGUUG CUG    UGUA Gc  ugua agg a
  ||||||||| |||||||||||||| |||    |||| ||  |||| ||| a
  cggcguuaA GACCUUAGUUCAAC GAC    acau cg  acgu uuc g
cc         C              -   UGaa    u  uc    g   g 

Annotation confidence High

Genome context

scaffold_12855: 584480-584577 [+]

Mature dvi-miR-284-5p

• Accession: MIMAT0032097
• Description: Drosophila virilis dvi-miR-284-5p mature miRNA
• Sequence: 10 - CCUGGAAUUAAGUUGACUGUGUAG - 33
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-284-3p

• Accession: MIMAT0008977
• Description: Drosophila virilis dvi-miR-284-3p mature miRNA
• Sequence: 68 - GUCAGCAACUUGAUUCCAGCA - 88
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372