Stem-loop dvi-mir-219

Accession

MI0009546

Description

Drosophila virilis dvi-mir-219 precursor miRNA

Sequence

uaauucgauuuuuagcuaUGAUUGUCCAAACGCAAUUCUUGuugauuucaaauacucaAGGGUUGCGACUGGGCAUCGCGgcucgaaaugagaaucc
..((((.(((((.((((.((((.(((((..(((((((((((...(((...)))...)))))))))))..))))))))).)))).)))))..))))..

Structure

ua    -g     u    a    U     AA           uug   u 
  auuc  auuuu agcu UGAU GUCCA  CGCAAUUCUUG   auu  
  ||||  ||||| |||| |||| |||||  |||||||||||   ||| c
  uaag  uaaag ucgG GCUA CGGGU  GCGUUGGGAac   uaa  
cc    ag     c    C    -     CA           uca   a 

Annotation confidence Not enough data

Genome context

scaffold_13049: 5991431-5991527 [-]

Mature dvi-miR-219-5p

• Accession: MIMAT0008978
• Description: Drosophila virilis dvi-miR-219-5p mature miRNA
• Sequence: 19 - UGAUUGUCCAAACGCAAUUCUUG - 41
• Evidence: experimental ; Illumina [2]

Mature dvi-miR-219-3p

• Accession: MIMAT0032098
• Description: Drosophila virilis dvi-miR-219-3p mature miRNA
• Sequence: 59 - AGGGUUGCGACUGGGCAUCGCG - 80
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218


2. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372