miRBase entry: dwi-mir-306-1

Stem-loop dwi-mir-306-1

Accession

MI0009554

Description

Drosophila willistoni dwi-mir-306-1 precursor miRNA

Sequence

gcUCAGGUACUUAGUGACUCUCAAagaauauaucuagacuugagagacgcucuguaccuagacu
.((.((((((..((((.((((((((((.....)))....))))))).))))..))))))))...

Structure

--g  C      UU    A       ----   a 
   cU AGGUAC  AGUG CUCUCAA    aga u
   || ||||||  |||| |||||||    ||| a
   ga uccaug  ucgc gagaguu    ucu u
uca  -      uc    a       caga   a

Annotation confidence Not enough data

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Genome context

scf2_1100000004874: 29027-29090 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from dwi-mir-306-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-306

Accession	MIMAT0008986
Description	Drosophila willistoni dwi-miR-306 mature miRNA
Sequence	3 - UCAGGUACUUAGUGACUCUCAA - 24
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218