miRBase entry: dwi-mir-13b-1

Stem-loop dwi-mir-13b-1


Accession
MI0009557
Description
Drosophila willistoni dwi-mir-13b-1 precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

ccaugucguuaaaauguuugugacuuuauguugugucucuauucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((..(((....))).)))))))))).)))))))))))...)))

Structure
   -ug           u      cuu    uu   u 
cca   ucguuaaaaug uuguga   uaug  gug c
|||   ||||||||||| ||||||   ||||  |||  
ggu   AGCAGUUUUAC GACACU   AUac  uau u
   uUG           C      ---    -u   c 


Annotation confidence Not enough data
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Genome context
scf2_1100000004902: 2143077-2143147 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dwi-mir-13b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-13b

Accession MIMAT0008990
Description Drosophila willistoni dwi-miR-13b mature miRNA
Sequence 46 - UAUCACAGCCAUUUUGACGAGU - 67
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218