miRBase entry: dwi-mir-9c-1

Stem-loop dwi-mir-9c-1

Accession

MI0009559

Description

Drosophila willistoni dwi-mir-9c-1 precursor miRNA

Sequence

uuuuugcuguuUCUUUGGUAUUCUAGCUGUAGAuuguuuuuugcacauuguauaucaucuaaagcuuuuauaccaaagcuccagcuuaaau
(((..((((...(((((((((...((((.(((((.(.....((((...))))...)))))).))))...)))))))))...))))..))).

Structure

-   uu    uuU         UCU    G     u uuuuu    c 
 uuu  gcug   CUUUGGUAU   AGCU UAGAu g     ugca  
 |||  ||||   |||||||||   |||| ||||| |     |||| a
 aaa  cgac   gaaaccaua   ucga aucua c     augu  
u   uu    cuc         uuu    a     - --uau    u

Annotation confidence Not enough data

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Genome context

scf2_1100000004874: 30527-30617 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from dwi-mir-9c-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-9c

Accession	MIMAT0008992
Description	Drosophila willistoni dwi-miR-9c mature miRNA
Sequence	12 - UCUUUGGUAUUCUAGCUGUAGA - 33
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218