miRBase entry: dwi-mir-13a

Stem-loop dwi-mir-13a


Accession
MI0009597
Description
Drosophila willistoni dwi-mir-13a precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

uacguaacucuucaaggggguugugaaauguugccauuuuauucaacucaUAUCACAGCCAUUUUGAUGAGUuucgug
((((.(((((.((((((.((((((((.(((..................))).)))))))).)))))).))))).))))

Structure
    u     u      g        a   uugccauu 
uacg aacuc ucaagg gguuguga aug        u
|||| ||||| |||||| |||||||| |||         
gugc uUGAG AGUUUU CCGACACU Uac        u
    u     U      A        A   ucaacuua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scf2_1100000004902: 2143221-2143298 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dwi-mir-13a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-13a

Accession MIMAT0009030
Description Drosophila willistoni dwi-miR-13a mature miRNA
Sequence 51 - UAUCACAGCCAUUUUGAUGAGU - 72
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218