miRBase entry: dwi-mir-31b

Stem-loop dwi-mir-31b


Accession
MI0009605
Description
Drosophila willistoni dwi-mir-31b precursor miRNA


Sequence

acuaguggauuUGGCAAGAUGUCGGAAUAGCUGaaagucacacaaaaucauaaaauguuugccguuuuguuauuguugugaauuuuauugauuucaaaaauuacggcuaugccucaucuagucaauugcauuaguuug
(((((((.(.(((((.(((((..((.((((((((((((((((...(((.((((((((.....)))))))).)))..)))).)))))..((((((...))))))))))))).)).))))).))))).).)))))))...

Structure
---       g u     A     UC  A       -----------------     -    caa   c        u 
   acuagug a uUGGC AGAUG  GG AUAGCUG                 aaagu caca   aau auaaaaug u
   ||||||| | ||||| |||||  || |||||||                 ||||| ||||   ||| |||||||| u
   ugauuac u aacug ucuac  cc uaucggc                 uuuua gugu   uua uguuuugc g
guu       g u     a     -u  g       auuaaaaacuuuaguua     a    -ug   u        c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
scf2_1100000004963: 794488-794625 [+]

Database links

Mature dwi-miR-31b

Accession MIMAT0009037
Description Drosophila willistoni dwi-miR-31b mature miRNA
Sequence 12 - UGGCAAGAUGUCGGAAUAGCUG - 33
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218