miRBase entry: dwi-mir-87-1

Stem-loop dwi-mir-87-1


Accession
MI0009608
Description
Drosophila willistoni dwi-mir-87-1 precursor miRNA
Gene family
MIPF0000152; mir-87


Sequence

cauauuucauucgcgccuguaucuugcugaaccguuaccaauugugaucaucauuuccggUUGAGCAAAAUUUCAGGUGUGugagaaauuugu
((.(((((.(.((((((((.((.(((((.(((((........((....)).......))))).))))).))..)))))))).).))))).)).

Structure
-  u     a u        -u  c     g     uuaccaau  u 
 ca auuuc u cgcgccug  au uugcu aaccg        ug g
 || ||||| | ||||||||  || ||||| |||||        ||  
 gu uaaag g GUGUGGAC  UA AACGA UUggc        ac a
u  u     a u        UU  A     G     -cuuuacu  u 


Annotation confidence Not enough data
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Genome context
scf2_1100000004521: 12257703-12257795 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dwi-mir-87-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dwi-miR-87

Accession MIMAT0008982
Description Drosophila willistoni dwi-miR-87 mature miRNA
Sequence 61 - UUGAGCAAAAUUUCAGGUGUG - 81
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218