miRBase entry: dwi-mir-87-1

Stem-loop dwi-mir-87-1

Accession

MI0009608

Description

Drosophila willistoni dwi-mir-87-1 precursor miRNA

Sequence

cauauuucauucgcgccuguaucuugcugaaccguuaccaauugugaucaucauuuccggUUGAGCAAAAUUUCAGGUGUGugagaaauuugu
((.(((((.(.((((((((.((.(((((.(((((........((....)).......))))).))))).))..)))))))).).))))).)).

Structure

-  u     a u        -u  c     g     uuaccaau  u 
 ca auuuc u cgcgccug  au uugcu aaccg        ug g
 || ||||| | ||||||||  || ||||| |||||        ||  
 gu uaaag g GUGUGGAC  UA AACGA UUggc        ac a
u  u     a u        UU  A     G     -cuuuacu  u

Annotation confidence Not enough data

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Genome context

scf2_1100000004521: 12257703-12257795 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dwi-mir-87-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-87

Accession	MIMAT0008982
Description	Drosophila willistoni dwi-miR-87 mature miRNA
Sequence	61 - UUGAGCAAAAUUUCAGGUGUG - 81
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218