miRBase entry: dwi-mir-277

Stem-loop dwi-mir-277

Accession

MI0009612

Description

Drosophila willistoni dwi-mir-277 precursor miRNA

Sequence

uugaagguuuugggcugcgugucaggagugcauuugcacugaaaauuucuaaaagcuugUAAAUGCACUAUCUGGUACGACAuuccagaacguacaauc
(((.(.((((((((.(((((((((((((((((((((((((.............))..)))))))))))).))))))))).)).)))))))).).)))..

Structure

--   a g        c  -         -            --  gaaaa 
  uug a guuuuggg ug cgugucagg agugcauuugca  cu     u
  ||| | |||||||| || ||||||||| ||||||||||||  ||     u
  aac u caagaccu AC GCAUGGUCU UCACGUAAAUgu  ga     u
cu   a g        u  A         A            uc  aaauc

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scf2_1100000004902: 11168103-11168201 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dwi-mir-277

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-277

Accession	MIMAT0009040
Description	Drosophila willistoni dwi-miR-277 mature miRNA
Sequence	60 - UAAAUGCACUAUCUGGUACGACA - 82
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218