miRBase entry: dwi-mir-275

Stem-loop dwi-mir-275

Accession

MI0009617

Description

Drosophila willistoni dwi-mir-275 precursor miRNA

Sequence

gucucuuaccuugcgcgcuaaucagugaccagggcugaguaauuuuauucaauacagUCAGGUACCUGAAGUAGCGCGCGugguuuuagacca
((((...(((.(((((((((.((((..(((..(((((.................))))).)))..))))..))))))))).)))...))))..

Structure

--    cuu   u         -a    ug   ag     aguaauu 
  gucu   acc ugcgcgcua  ucag  acc  ggcug       u
  ||||   ||| |||||||||  ||||  |||  |||||       u
  caga   ugg GCGCGCGAU  AGUC  UGG  CUgac       a
ac    uuu   u         GA    CA   -A     auaacuu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scf2_1100000004585: 5257600-5257692 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dwi-mir-275

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-275

Accession	MIMAT0009045
Description	Drosophila willistoni dwi-miR-275 mature miRNA
Sequence	58 - UCAGGUACCUGAAGUAGCGCGCG - 80
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218