miRBase entry: dwi-mir-281-1

Stem-loop dwi-mir-281-1

Accession

MI0009620

Description

Drosophila willistoni dwi-mir-281-1 precursor miRNA

Sequence

cgaauaagugaauaAAGAGAGCUGUCCGUCGACAGUccaguuaaacgauuuuaaaacUGUCAUGGAAUUGCUCUCUUUGUaugauauucg
((((((.....(((((((((((..(((((.((((((....(((((....))))).)))))))))))...)))))))))))....))))))

Structure

      aguga           -UG     C      ccag     c 
cgaaua     auaAAGAGAGC   UCCGU GACAGU    uuaaa g
||||||     |||||||||||   ||||| ||||||    |||||  
gcuuau     UGUUUCUCUCG   AGGUA CUGUca    aauuu a
      -agua           UUA     -      ---a     u

Annotation confidence Not enough data

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Genome context

scf2_1100000004954: 3241883-3241972 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dwi-mir-281-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-281-3p

Accession	MIMAT0008995
Description	Drosophila willistoni dwi-miR-281-3p mature miRNA
Sequence	58 - UGUCAUGGAAUUGCUCUCUUUGU - 80
Evidence	not_experimental

Mature dwi-miR-281-1-5p

Accession	MIMAT0008994
Description	Drosophila willistoni dwi-miR-281-1-5p mature miRNA
Sequence	15 - AAGAGAGCUGUCCGUCGACAGU - 36
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218