miRBase entry: dwi-mir-100

Stem-loop dwi-mir-100

Accession

MI0009622

Description

Drosophila willistoni dwi-mir-100 precursor miRNA

Sequence

ccauuaacagaAACCCGUAAAUCCGAACUUGUGcuguuuuauaucuguuacaagaccggcauuaugggagucugucaaugca
.((((.(((((..(((((((..(((..(((((((.(........).).))))))..)))..)))))))..))))).))))..

Structure

-c    a     AA       AU   AA      - u uuu 
  cauu acaga  CCCGUAA  CCG  CUUGUG c g   u
  |||| |||||  |||||||  |||  |||||| | |    
  guaa ugucu  ggguauu  ggc  gaacau g c   a
ac    c     ga       ac   ca      u u uau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scf2_1100000004521: 11622825-11622906 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dwi-mir-100

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dwi-miR-100

Accession	MIMAT0009048
Description	Drosophila willistoni dwi-miR-100 mature miRNA
Sequence	12 - AACCCGUAAAUCCGAACUUGUG - 33
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218