miRBase entry: dya-mir-133

Stem-loop dya-mir-133

Accession

MI0009644

Description

Drosophila yakuba dya-mir-133 precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

ugcaacgcuguguguagcugguugacaucgggucagaucuguuuuuccaagcauUUGGUCCCCUUCAACCAGCUGUagccagugguugau
..((((((((..(((((((((((((....(((((((((((.........)).)))))).)))..)))))))))))))..)))).))))..

Structure

ug    -    ug             cauc   -      -  guu 
  caac gcug  uguagcugguuga    ggg ucagau cu   u
  |||| ||||  |||||||||||||    ||| |||||| ||   u
  guug ugac  aUGUCGACCAACU    CCC GGUUua ga   u
ua    g    cg             --UC   U      c  acc

Annotation confidence Not enough data

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Genome context

chr2R: 6964811-6964900 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dya-mir-133

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dya-miR-133

Accession	MIMAT0009072
Description	Drosophila yakuba dya-miR-133 mature miRNA
Sequence	55 - UUGGUCCCCUUCAACCAGCUGU - 76
Evidence	not_experimental

References

PubMed ID: 17994087
Evolution of genes and genomes on the Drosophila phylogeny
"Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
"Nature (2007) 450:203-218