miRBase entry: dya-mir-13b-1

Stem-loop dya-mir-13b-1


Accession
MI0009658
Description
Drosophila yakuba dya-mir-13b-1 precursor miRNA


Sequence

ccaugucguuaaaauguuugugaacuuauguauucgcaaucaUAUCACAGCCAUUUUGACGAGUuugg
(((..(((((((((((.((((((...((((..........)))))))))).)))))))))))...)))

Structure
   -ug           u      acu    uauu 
cca   ucguuaaaaug uuguga   uaug    c
|||   ||||||||||| ||||||   ||||     
ggu   AGCAGUUUUAC GACACU   AUac    g
   uUG           C      ---    uaac 


Annotation confidence Not enough data
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Genome context
chr3R: 15188737-15188804 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from dya-mir-13b-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-13b

Accession MIMAT0009056
Description Drosophila yakuba dya-miR-13b mature miRNA
Sequence 43 - UAUCACAGCCAUUUUGACGAGU - 64
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218