miRBase entry: dya-mir-124

Stem-loop dya-mir-124


Accession
MI0009680
Description
Drosophila yakuba dya-mir-124 precursor miRNA


Sequence

uacguuuuucuccugguauccacuguaggccuauauguauuuccaccaUAAGGCACGCGGUGAAUGCCAAGagcgaacgca
..(((((..(((.((((((.((((((..((((.((((.........))))))))..)))))).)))))).))).)))))..

Structure
ua     uu   c      c      ag    a    uau 
  cguuu  cuc ugguau cacugu  gccu uaug   u
  |||||  ||| |||||| ||||||  |||| ||||   u
  gcaag  gaG ACCGUA GUGGCG  CGGA AUac   c
ac     -c   A      A      CA    -    cac 


Annotation confidence Not enough data
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Genome context
chr2R: 3533191-3533271 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dya-mir-124
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dya-miR-124

Accession MIMAT0009105
Description Drosophila yakuba dya-miR-124 mature miRNA
Sequence 49 - UAAGGCACGCGGUGAAUGCCAAG - 71
Evidence not_experimental

References

  1. PubMed ID: 17994087
    Evolution of genes and genomes on the Drosophila phylogeny
    "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
    "Nature (2007) 450:203-218