Stem-loop mmu-mir-1938

Accession

MI0009927

Symbol

MGI: Mir1938

Description

Mus musculus mmu-mir-1938 precursor miRNA

Literature search

1 open access papers mention mmu-mir-1938
(1 sentences)

Sequence

332 reads, 2.0 reads per million, 64 experiments

cuggggcgCGGUGGGACUUGUAGUUCGGUCuucgcuucggacgcccaagucugcauagcgcgugguacggCUGAACUGCAGUUCCCAUCAUGcccuggga
((((((((.(((((((.(((((((((((((..((((.(((((......)))))...))))........))))))))))))).))))))).))))))))..

Structure

--        C       C             ------uu    --u     gc 
  cuggggcg GGUGGGA UUGUAGUUCGGUC        cgcu   cggac  c
  |||||||| ||||||| |||||||||||||        ||||   |||||   
  ggucccGU CUACCCU GACGUCAAGUCgg        gcga   gucug  c
ag        A       U             cauggugc    uac     aa 

Annotation confidence Medium

Genome context

12: 40272711-40272810 [-]

Mature mmu-miR-1938-5p

• Accession: MIMAT0009402
• Description: Mus musculus mmu-miR-1938-5p mature miRNA
• Sequence: 9 - CGGUGGGACUUGUAGUUCGGUC - 30
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-1938-3p

• Accession: MIMAT0050710
• Description: Mus musculus mmu-miR-1938-3p mature miRNA
• Sequence: 71 - CUGAACUGCAGUUCCCAUCAUG - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797