Stem-loop mmu-mir-1946a

Accession

MI0009936

Symbol

MGI: Mir1946a

Description

Mus musculus mmu-mir-1946a precursor miRNA

Literature search

1 open access papers mention mmu-mir-1946a
(1 sentences)

Sequence

299 reads, 416 reads per million, 60 experiments

aacuuaaagaaaucuauAGCCGGGCAGUGGUGGCACACACUUUUaaucccaacacuugugaggcacaggcagguggauuucugaucaaaggcaugcgccaccacucucggcuuucuccucuccuuuuuuguuaa
.......(((.......(((((((.(((((((((.((..(((((.(((....(((((((.........))))))).......))).)))))..)).))))))))))))))))......))).............

Structure

------aacuuaa   aaucuau       C         A  CA     a   ---ccaa       gag 
             aga       AGCCGGG AGUGGUGGC CA  CUUUU auc       cacuugu   g
             |||       ||||||| ||||||||| ||  ||||| |||       |||||||   c
             ucu       ucggcuc ucaccaccg gu  ggaaa uag       guggacg   a
aauuguuuuuucc   -ccucuu       -         c  ac     c   ucuuuag       gac 

Annotation confidence Not enough data

Genome context

chr16: 32267450-32267583 [-]

Mature mmu-miR-1946a

• Accession: MIMAT0009412
• Description: Mus musculus mmu-miR-1946a mature miRNA
• Sequence: 18 - AGCCGGGCAGUGGUGGCACACACUUUU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797