Stem-loop mmu-mir-1953

Accession

MI0009948

Symbol

MGI: Mir1953

Description

Mus musculus mmu-mir-1953 precursor miRNA

Sequence

1057 reads, 40.0 reads per million, 107 experiments

ggugcugccuggucuUGGGAAAGUUCUCAGGCUUCUgagaauuugcaggagcagaaggcugUGAGGUUCCCCUCUUCCUggcagcccua
((.((((((.((....(((.((.(((.(((.((((((..............)))))).))).))).)).)))....)).))))))))..

Structure

--  u      u  ucuU   A  G   U   G      agaauu 
  gg gcugcc gg    GGG AA UUC CAG CUUCUg      u
  || |||||| ||    ||| || ||| ||| ||||||       
  cc cgacgg CC    CCC UU GAG guc gaagac      g
au  -      U  UUCU   C  G   U   g      gaggac 

Annotation confidence Medium

Genome context

2: 151809449-151809537 [-]

Mature mmu-miR-1953-5p

• Accession: MIMAT0009424
• Description: Mus musculus mmu-miR-1953-5p mature miRNA
• Sequence: 16 - UGGGAAAGUUCUCAGGCUUCU - 36
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-1953-3p

• Accession: MIMAT0061416
• Description: Mus musculus mmu-miR-1953-3p mature miRNA
• Sequence: 62 - UGAGGUUCCCCUCUUCCU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797