Stem-loop mmu-mir-1964

Accession

MI0009961

Symbol

MGI: Mir1964

Description

Mus musculus mmu-mir-1964 precursor miRNA

Literature search

1 open access papers mention mmu-mir-1964
(1 sentences)

Sequence

9530 reads, 63 reads per million, 81 experiments

cuuucuugcgaAGCUGGAGCACAAAAGCCGGUGccggugugaugccuacaCCGACUUCUGGGCUCCGGCUUUggaaggaagga
(((((((.((((((((((((.((.(((.(((((..(((.....)))..))))).))).)).)))))))))))).)))))))..

Structure

--       g            A  A   C     cc   g 
  cuuucuu cgaAGCUGGAGC CA AAG CGGUG  ggu u
  ||||||| |||||||||||| || ||| |||||  ||| g
  gaaggaa gUUUCGGCCUCG GU UUC GCCac  ccg a
ag       g            G  C   A     au   u 

Annotation confidence High

Genome context

chr7: 29773294-29773376 [+]

Mature mmu-miR-1964-5p

• Accession: MIMAT0017349
• Description: Mus musculus mmu-miR-1964-5p mature miRNA
• Sequence: 12 - AGCUGGAGCACAAAAGCCGGUG - 33
• Evidence: experimental ; Illumina [2]

Mature mmu-miR-1964-3p

• Accession: MIMAT0009437
• Description: Mus musculus mmu-miR-1964-3p mature miRNA
• Sequence: 51 - CCGACUUCUGGGCUCCGGCUUU - 72
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797