Stem-loop bmo-mir-927

Accession

MI0010000

Description

Bombyx mori bmo-mir-927 precursor miRNA

Literature search

1 open access papers mention bmo-mir-927
(3 sentences)

Sequence

299 reads, 56 reads per million, 3 experiments

ugcagccuuuuugcUUUAGAAUUCCUACGCUUUACCguugccaaguaguugggCAAAGCGUUUGGAUUCUAAaacgaaauaacugcca
.((((...(((((.((((((((((..(((((((.((...((......))..)).)))))))..)))))))))).)))))...))))..

Structure

-u    ccu     c          CU       A  guu  ca 
  gcag   uuuug UUUAGAAUUC  ACGCUUU CC   gc  a
  ||||   ||||| ||||||||||  ||||||| ||   ||   
  cguc   aaagc aAAUCUUAGG  UGCGAAA gg   ug  g
ac    aau     a          UU       C  -gu  au 

Annotation confidence High

Genome context

NW_004581679.1: 1013971-1014058 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-927

Mature bmo-miR-927-5p

• Accession: MIMAT0009157
• Description: Bombyx mori bmo-miR-927-5p mature miRNA
• Sequence: 15 - UUUAGAAUUCCUACGCUUUACC - 36
• Evidence: experimental ; Illumina [2]

Mature bmo-miR-927-3p

• Accession: MIMAT0015288
• Description: Bombyx mori bmo-miR-927-3p mature miRNA
• Sequence: 54 - CAAAGCGUUUGGAUUCUAA - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 18714353
   The silkworm (Bombyx mori) microRNAs and their expressions in multiple developmental stages
   Yu X, Zhou Q, Li SC, Luo Q, Cai Y, Lin WC, Chen H, Yang Y, Hu S, Yu J
   PLoS One (2008) 3:e2997