Stem-loop bfl-mir-29b

Accession

MI0010016

Description

Branchiostoma floridae bfl-mir-29b precursor miRNA

Sequence

cacugcagguuuucuauccuggaagACUGGUUCCAAGUGGUGGGUAGAuggcacugagaucuAGCACCAUUUGAAAUCAGUGCUUucaggacuag
.............(((((((((((((((((((.(((((((((..(((((.........))))).))))))))).))))))).))))))))).)))

Structure

cacugcagguuuu   -         -       C         GG     ggc 
             cua uccuggaag ACUGGUU CAAGUGGUG  UAGAu   a
             ||| ||||||||| ||||||| |||||||||  |||||   c
             gau aggacuUUC UGACUAA GUUUACCAC  Aucua   u
-------------   c         G       A         -G     gag 

Annotation confidence Low

Genome context

Unknown

Mature bfl-miR-29b-3p

• Accession: MIMAT0009472
• Description: Branchiostoma floridae bfl-miR-29b-3p mature miRNA
• Sequence: 63 - AGCACCAUUUGAAAUCAGUGCUU - 85
• Evidence: experimental ; 454 [1]

Mature bfl-miR-29b-5p

• Accession: MIMAT0019140
• Description: Branchiostoma floridae bfl-miR-29b-5p mature miRNA
• Sequence: 26 - ACUGGUUCCAAGUGGUGGGUAGA - 48
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27