Stem-loop bfl-mir-34a

Accession

MI0010019

Description

Branchiostoma floridae bfl-mir-34a precursor miRNA

Gene family

MIPF0000039; mir-34

Sequence

ugguuaccuguguguugcugUGGCAGUGUGGAUAGCUGGCCGUUUcuaauauaacagccacuguacacacucccguaauaacacacggacuuacaacacgg
.......((((((((((.(((((.((((((.((((.((((.(((........))).)))))))).)))))).))))).)))))))))).............

Structure

------ugguuac          c     C      G    C    C   Ucu 
             cuguguguug ugUGG AGUGUG AUAG UGGC GUU   a
             |||||||||| ||||| |||||| |||| |||| |||    
             ggcacacaau augcc ucacac uguc accg caa   a
ggcacaacauuca          a     c      a    -    a   uau 

Annotation confidence Not enough data

Genome context

GG666685.1: 1087742-1087842 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bfl-mir-34a

Mature bfl-miR-34a

• Accession: MIMAT0009475
• Description: Branchiostoma floridae bfl-miR-34a mature miRNA
• Sequence: 21 - UGGCAGUGUGGAUAGCUGGCCGUUU - 45
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68