Stem-loop bfl-mir-92a-1

Accession

MI0010022

Description

Branchiostoma floridae bfl-mir-92a-1 precursor miRNA

Sequence

cacauauugugcccugucagacaggucaggauugguggcaaugcuuauaaacgugucagUAUUGCACUUGUCCCGGCCUUUcugauugguuaaaagucugc
((((...)))).((.((((((.(((((.((((.((((.(((((((.(((....))).))))))))))).)))).))))).)))))).))............

Structure

cacauauugugc  u      c     a    u    g       u   a 
            cc gucaga agguc ggau ggug caaugcu aua a
            || |||||| ||||| |||| |||| ||||||| |||  
            gg uagucU UCCGG CCUG UCAC GUUAUga ugu c
cgucugaaaauu  u      U     C    U    -       c   g 

Annotation confidence Not enough data

Genome context

GG666632.1: 777177-777277 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bfl-mir-92a-1

Mature bfl-miR-92a

• Accession: MIMAT0009478
• Description: Branchiostoma floridae bfl-miR-92a mature miRNA
• Sequence: 60 - UAUUGCACUUGUCCCGGCCUUU - 81
• Evidence: experimental ; 454 [1], cloned [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49