Stem-loop bfl-mir-133

Accession

MI0010028

Description

Branchiostoma floridae bfl-mir-133 precursor miRNA

Literature search

1 open access papers mention bfl-mir-133
(2 sentences)

Sequence

aguaucagggaugcugugcuaaagcugguacauuggaaccaaaucaacuccucaauggauuUGGUCCCCUUCAACCAGCUGUAgcauugcacuuuucaagc
......((((.(((.((((((.(((((((.....((.((((((((............)))))))).)).....))))))).)))))).)))))))......

Structure

aguauc    a   u      a       acauu  a        aacuc 
      aggg ugc gugcua agcuggu     gg accaaauc     c
      |||| ||| |||||| |||||||     || ||||||||      
      uuuc acg uacgAU UCGACCA     CC UGGUuuag     u
cgaacu    -   u      G       ACUUC  C        guaac 

Annotation confidence Not enough data

Genome context

ref|NC_049980.1|: 25933081-25933178 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-133

Mature bfl-miR-133-3p

• Accession: MIMAT0009484
• Description: Branchiostoma floridae bfl-miR-133-3p mature miRNA
• Sequence: 62 - UGGUCCCCUUCAACCAGCUGUA - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68