miRBase entry: bfl-mir-217

Stem-loop bfl-mir-217


Accession
MI0010040
Description
Branchiostoma floridae bfl-mir-217 precursor miRNA


Sequence


cugggacUACUGCAUCAGGAACUGAUUGGAugggauacaaaucaaucuguuccucaugcauggcucac
.((((.(((.(((((.((((((.((((((.((.....))..)))))).)))))).)))))))))))).

Structure
c    a   C     C      U      -A  g 
 uggg cUA UGCAU AGGAAC GAUUGG  ug g
 |||| ||| ||||| |||||| ||||||  || a
 acuc ggu acgua uccuug cuaacu  ac u
c    -   -     c      u      aa  a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NC_049979.1|: 16399803-16399870 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bfl-mir-217
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bfl-miR-217-5p

Accession MIMAT0009496
Description Branchiostoma floridae bfl-miR-217-5p mature miRNA
Sequence 8 - UACUGCAUCAGGAACUGAUUGGA - 30
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68