Stem-loop cte-mir-1

Accession

MI0010046

Description

Capitella teleta cte-mir-1 precursor miRNA

Sequence

accggcgugcgauugugacauacuuccuuacaacgccauauuucccauauuauugguaUGGAAUGUAAAGAAGUAUGUAGcauucccaugcacu
....(((((.((.(((.(((((((((.(((((...(((((....(((......))))))))..))))).))))))))).))).)).)))))...

Structure

accg     c  u   g         c     acg     uuuc   ua 
    gcgug ga ugu acauacuuc uuaca   ccaua    cca  u
    ||||| || ||| ||||||||| |||||   |||||    |||   
    cguac cu acG UGUAUGAAG AAUGU   GGUau    ggu  u
-uca     c  u   A         A     -AA     ----   ua 

Annotation confidence Not enough data

Genome context

KB301107.1: 105938-106031 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from cte-mir-1

Mature cte-miR-1

• Accession: MIMAT0009502
• Description: Capitella teleta cte-miR-1 mature miRNA
• Sequence: 59 - UGGAAUGUAAAGAAGUAUGUAG - 80
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68