miRBase entry: lgi-mir-92

Stem-loop lgi-mir-92

Accession

MI0010116

Description

Lottia gigantea lgi-mir-92 precursor miRNA

Sequence

cauaaugaagaaagaugaguugcaggucgugauauuugcaauauggagaagaauaaucaAAUUGCACUUGUCCCGGCCUGCugcaaagucuucaccucaa
.....((((((.......((.((((((((.((((..((((((.((............)).))))))..)))).)))))))).))....))))))......

Structure

-cauaa      aagauga  u        u    uu      a  gagaa 
      ugaaga       gu gcaggucg gaua  ugcaau ug     g
      ||||||       || |||||||| ||||  |||||| ||      
      acuucu       cg CGUCCGGC CUGU  ACGUUA ac     a
aacucc      ---gaaa  u        C    UC      A  uaaua

Annotation confidence Not enough data

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Genome context

KB202544.1: 43354-43453 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from lgi-mir-92

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature lgi-miR-92

Accession	MIMAT0009574
Description	Lottia gigantea lgi-miR-92 mature miRNA
Sequence	60 - AAUUGCACUUGUCCCGGCCUGC - 81
Evidence	not_experimental

References

PubMed ID: 19196333
The deep evolution of metazoan microRNAs
"Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
"Evol Dev (2009) 11:50-68